No, he really didn't.
Obama wrote:
some of it may just be the fact that my middle name is Hussein...Some of it may have to do with the fact that I have actively reached out to the Muslim community, and I think that sometimes, particularly in the Middle East, there's the feeling of the friend of my enemy must be my enemy." Mr. Obama said, but added, "...the truth of the matter is, is that my outreach to the Muslim community is designed precisely to reduce the antagonism and the dangers posed by a hostile Muslim world to Israel and to the West."
However, just as there're some hillbillys whom may have a biased opinion against the President based on his middle name, his policies & the color of his skin also play a part.
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"The Rich are there to take all of the money & pay none of the taxes, the middle class is there to do all the work and pay all the taxes, and the poor are there to scare the crap out of the middle class." -George Carlin